CDS
| Accession Number | TCMCG002C12044 |
| gbkey | CDS |
| Protein Id | XP_020091974.1 |
| Location | join(4095776..4095877,4096002..4096062,4096332..4096368,4097304..4097434,4097544..4097636,4098100..4098178,4099132..4099265,4099959..4100098,4100677..4100727,4100809..4100888,4100974..4101028,4101106..4101217,4101544..4102036,4102169..4102382,4102474..4102544,4102703..4102871,4102946..4103075,4104149..4104561,4105323..4105586) |
| Gene | LOC109712672 |
| GeneID | 109712672 |
| Organism | Ananas comosus |
Protein
| Length | 942aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA371634 |
| db_source | XM_020236385.1 |
| Definition | RNA-binding protein 28 isoform X2 [Ananas comosus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA recognition motif |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14573
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGGAAGAGGAAAAGAGGTGACAACAATGGCGGCGGCGCTGAGCACTGCCCCGCCACGATCTTCGTCTCCAACCTCCCTTACTCATTTAAGTCGTCGCAGTTGGAGGAGGTTTTTAGTGAGGTGGGTCCTGTGAGGCGCTGCTTCATGGTTACTCAGAAGGGCTCAGATGTAAGCCGTGGTTTTGGCTACGTGCAATTTGCTGCTGCAAGTGACGCCGAACGTGCTATTGAACTTAAAAATGGTTCAGCTATTAGTGGTAGGAAAATCAGAGTGAAACTTGCAATGCACCGCCTTCCTCGTGAGCAGCGCTCGCAGAAGGAAAAAAATGTCAATTCCGAGGACTCTACTCTGCAAAATGAGAAAGTTGATCAATCATCCAGAGCCAGAGAAAATAAGGAGACTTCTCAGGAAGAGAAAACAGGGGCCATTAAGGACGTTGGAACATCTACTACAATAAGTAACAGCCAAACTGATAAGGTGGAAGGTTCAGAAAAACAGAGGGTTGCAAGAACAGTAATATTCGGCGGGCTTCTTAACTCTGATATGGCAGTTGAAGTGTTTCGTCGGGCTGGAGAGGTTGGCACTATAGTCTCCATCTCTTACCCTCTTCCGAAGGAAGAGTTAGAGCTCCGTGCGCTTTCACGAGATGGGTGCACTTTAGAAGCTTCAGCAGTACTTTATGCAACTGTTAAATCAGCACAAGAAGCTGTCAGAAGGTTGCATCAGCAAGAGATCAAAGGCGGACGTGTTTGGGCTCGCCAATTGGGTGGGGAGGGCTCAAAAGTTAGGAAGTGGAGGGTGATTGTCAGGAATCTACCATTCAAGGTCACAACAAAAGAGGTCAAAGATGTATTTAGCTCCGCAGGTTTTGTCTGGGATGTGTTAATTCCACATAACTCAGAAGGAATATCAAAAGGCTTTGCTTTTGTCTCATTAACCTGCAAGCAGGACGCAGAAAAGGCCATAAAAGACATCAATGGACGAGTCATCGCAAAGAGAACTGTTGCTGTTGATTGGGCTGTTTCAAAGAGAGTATATGCAGTTGCTACAAATTCTGCTGCTTCAGAGGATGGACATTTAATGGGAAATGACAGTGACAATGATGAGCAAAGAGAATCAACTGAAGAAAAGGATGATGATTCTGAAAGTGATCTTGATGTTGGAGCTGATCCTGTTGAAATTGACTTCAGAAGTGAGGCTGAGGTTGCCAAAAAAGTCCTTGAAAACTTGATTAACTCCTCCATGAGTACATCTGAACCACCAGAGAAATCAGTTAGTGTAAGTCCAAGCATGGGTGGGAAAAGCACTGAAGTGAAGAACGCGAGTACAAGCAAAAGCAGCAAACTCCTAAATGTTCCTGTGCAAAATGGAGGGGGATTGGAATCAAAAGATGCCACAAGATCAGTAACTACCAATAACGAGACGGGAAAAGAAGATGCTGATTTAGATAGAACAGTATTCATAAGCAATCTTCCATTTGATGTCAGTGCTGAGGAGGTGAAGCAAAGGTTCTCTATATTTGGGGAGGTGCAATCTTGTTTCCCTGTCCTCCATCAACTCACCAAGAGACCAAGAGGAACTGCTTTTCTAAAATTCTCTTCAGCAGCTGCAGTAGATGCTGCAGTTTCTGCTGCAAATGCTACACCTGGTGTAGGAATTGTTATAAAGGGCAGAACATTAAAAGTTTTAAAGGCACTGGATAAGGAATCAGCTCATAAAAGGGTGCTTGAAAAGGCGAAGAATGAGGTTCATGATCGACGTAATTTATACCTAGCCAAGGAAGGTGAAATACTTCCTGGAACACCTGCTGCTGAAGGTGTATCAGAGGCTGACATGATGAAGCGAGAGACGTTATCAAGGAAAAAGATGGAAATGCTTCAGTCACCGAAGTTCCATGTATCAAGAACTAGACTTATTATCTATAATCTGCCAAAGACAATGACACCAGAGGAGGTGAAGAAACTTTGCAGAGATGCAGTCCTTTTGCGTGCCTCCAAACAAAACCCTGTCATACAAAAGGTAAAGCTTTTGATGGACGCAAAGAAGGGAACAGTTTCTGTGAAGAAACATTCACGTGGGGTAGCTTTTGTTGATTTTAAAGAACACGAGCATGCAATTGTCTGTCTGCGGGTTCTGAACAACAATCCTGAAACTTTTGGGCCGGAACGCCGTCCGATTGTGGAGTTTGCTCTTGATAACATCCAGAAGTTACAGCTGCAAAAAAAAAGGCAGGACTCTTTAGAAGAGAGTAGTGGCATTCCAGAAGCTGTAGAAACTGACGACAACAAGAGCAGCAAAAAGAGTATAAGAAAGTTTAAGTCAAAGAGAAGAAATGAGAGATCACTTAAAGTATCCGAACCTACTGAAGGGTCTGGAGCCGTTGGAGCTATCGATGTAGAAGGTGGTGCAAGAGAAAATGCAAGAGGTAGAAAGCAGAAGAGAATTCCAAGAGGAGGAAAGAAAGCTAATTTAGCTTCTAAGGTGGATCATGTCGAGGAGGGAAAGCCAAAAGCACGAGAAAGCGCAAATGTTAGAGGAAAACAGTCAATTACCTCAAAAAAAAAAGATACAGCGAATCGAAAGGAATCAACCACAAAATCTTACAAGAGAAAAGCTAAAACTGATGGTGGTTTAGAGCCTCAGAGGGCACGCAAAGATACGAAGAGAAGAAAAAAGGTATCATCAGGAGAGGAGGTTGTGGATAAGCTCGACAAGCTAATAGAACAGTACCGCTCCAAGTTTTCGCAACGCGGTGCTAATAAAAGCAAAGATGAAGCAAACTCTGGCCATAAAGAAGTCAGGCGGTGGTTTGAGTCAACTTCTTGA |
| Protein: MGKRKRGDNNGGGAEHCPATIFVSNLPYSFKSSQLEEVFSEVGPVRRCFMVTQKGSDVSRGFGYVQFAAASDAERAIELKNGSAISGRKIRVKLAMHRLPREQRSQKEKNVNSEDSTLQNEKVDQSSRARENKETSQEEKTGAIKDVGTSTTISNSQTDKVEGSEKQRVARTVIFGGLLNSDMAVEVFRRAGEVGTIVSISYPLPKEELELRALSRDGCTLEASAVLYATVKSAQEAVRRLHQQEIKGGRVWARQLGGEGSKVRKWRVIVRNLPFKVTTKEVKDVFSSAGFVWDVLIPHNSEGISKGFAFVSLTCKQDAEKAIKDINGRVIAKRTVAVDWAVSKRVYAVATNSAASEDGHLMGNDSDNDEQRESTEEKDDDSESDLDVGADPVEIDFRSEAEVAKKVLENLINSSMSTSEPPEKSVSVSPSMGGKSTEVKNASTSKSSKLLNVPVQNGGGLESKDATRSVTTNNETGKEDADLDRTVFISNLPFDVSAEEVKQRFSIFGEVQSCFPVLHQLTKRPRGTAFLKFSSAAAVDAAVSAANATPGVGIVIKGRTLKVLKALDKESAHKRVLEKAKNEVHDRRNLYLAKEGEILPGTPAAEGVSEADMMKRETLSRKKMEMLQSPKFHVSRTRLIIYNLPKTMTPEEVKKLCRDAVLLRASKQNPVIQKVKLLMDAKKGTVSVKKHSRGVAFVDFKEHEHAIVCLRVLNNNPETFGPERRPIVEFALDNIQKLQLQKKRQDSLEESSGIPEAVETDDNKSSKKSIRKFKSKRRNERSLKVSEPTEGSGAVGAIDVEGGARENARGRKQKRIPRGGKKANLASKVDHVEEGKPKARESANVRGKQSITSKKKDTANRKESTTKSYKRKAKTDGGLEPQRARKDTKRRKKVSSGEEVVDKLDKLIEQYRSKFSQRGANKSKDEANSGHKEVRRWFESTS |